ESTOUP Arnaud
arnaud.estoup@inrae.fr
+33 4 99 62 33 38

Arnaud ESTOUP

Research Director, INRAE

Area(s)

Collective responsibility(ies)

Last publications
Ulmer R., Couty A., Eslin P., Catterou M., Baliteau L., Bonis A., Borowiec N., Colinet H., Delbac L., Dubois F., Estoup A., Froissard J., Gallet‐Moron E., Gard B., Georges R., Gibert P., Le Goff I., Lemauviel‐Lavenant S., Loucougaray G., Michelot‐Antalik A., Odoux J.F., Pincebourde S., Rode N.O., Thaon M., Till‐Bottraud I. & Chabrerie O. 2022. Macroecological patterns of fruit infestation rates by the invasive fly Drosophila suzukii in the wild reservoir host plant Sambucus nigra. Agricultural and Forest Entomology 24 : 548-563. (https://dx.doi.org/10.1111/afe.12520)
Olazcuaga* L., Foucaud J., Deschamps C., Loiseau A., Claret J.-L., Vedovato R., Guilhot* R., Sevely C., Gautier M., Hufbauer R.A., Rode N.O. & Estoup A. 2022. Rapid and transient evolution of local adaptation to seasonal host fruits in an invasive pest fly. Evolution Letters 6 : 490-505. (https://dx.doi.org/10.1002/evl3.304)
Gautier M., Vitalis R., Flori L. & Estoup A. 2022. ƒ‐statistics estimation and admixture graph construction with Pool‐Seq or allele count data using the R package poolfstat. Molecular Ecology Resources 22 : 1394-1416. (https://dx.doi.org/10.1111/1755-0998.13557)
Mérel V., Gibert P., Buch I., Rodriguez Rada V., Estoup A., Gautier M., Fablet M., Boulesteix M., Vieira C. & Arkhipova I. 2021. The worldwide invasion of Drosophila suzukii is accompanied by a large increase of transposable element load and a small number of putatively adaptive insertions. Molecular Biology and Evolution 38 : 4252-4267. (https://dx.doi.org/10.1093/molbev/msab155)
Olazcuaga* L., Foucaud J., Gautier M., Deschamps C., Loiseau A., Leménager N., Facon B., Ravigné V., Hufbauer R.A., Estoup A. & Rode N.O. 2021. Adaptation and correlated fitness responses over two time scales in Drosophila suzukii populations evolving in different environments. Journal of Evolutionary Biology 34 : 1225-1240. (https://dx.doi.org/10.1111/jeb.13878)
Collin F.D., Durif G., Raynal L., Lombaert E., Gautier M., Vitalis R., Marin J.M. & Estoup A. 2021. Extending approximate Bayesian computation with supervised machine learning to infer demographic history from genetic polymorphisms using DIYABC Random Forest. Molecular Ecology Resources 21 : 2598-2613. (https://dx.doi.org/10.1111/1755-0998.13413)
Olazcuaga L., Loiseau A., Parrinello H., Paris M., Fraimout A., Guedot C., Diepenbrock L.M., Kenis M., Zhang J., Chen X., Borowiec N., Facon B., Vogt H., Price D.K., Vogel H., Prud’homme B., Estoup A. & Gautier M. 2020. A whole-genome scan for association with invasion success in the fruit fly Drosophila suzukii using contrasts of allele frequencies corrected for population structure. Molecular Biology And Evolution 37 : 2369-2385. (https://dx.doi.org/10.1093/molbev/msaa098)
Paris M., Boyer R., Jaenichen R., Wolf J., Karageorgi M., Green J., Cagnon M., Parinello H., Estoup A., Gautier M., Gompel N. & Prud'homme B. 2020. Near-chromosome level genome assembly of the fruit pest Drosophila suzukii using long-read sequencing. Scientific Reports 10 : 11227. (https://dx.doi.org/10.1038/s41598-020-67373-z)
Foucaud J., Hufbauer R., Ravigné V., Olazcuaga L., Loiseau A., Ausset A., Wang S., Zang L.-S., Leménager N., Tayeh A., Weyna A., Gneux P., Bonnet E., Dreuilhe V., Poutout B., Estoup A. & Facon B. 2020. How do invasion syndromes evolve? An experimental evolution approach using the ladybirdbug Harmonia axyridis. PCI Evolutionary Biology bioRxiv 849968 : peer-reviewed and recommended by PCI Evolutionary Biology. (https://dx.doi.org/10.24072/pci.evolbiol.100096)
Chapuis M.-P., Raynal L., Plantamp C., Meynard C., Blondin L., Marin J.-M. & Estoup A. 2020. A young age of subspecific divergence in the Desert locust Schistocerca gregaria, inferred by ABC Random Forest. PCI Evolutionary Biology bioRxiv, 671867 ver. 4 : peer-reviewed and recommended by PCI Evolutionary Biology. (https://dx.doi.org/0.24072/pci.evolbiol.100091)