PERRIER Charles
charles.perrier@inrae.fr

Charles PERRIER

Research manager, INRAE

Area(s)

Collective responsibility(ies)

Scientific Events Group

I use population genetics and genomics approaches to help understand the demographic, ecological and evolutionary dynamics of populations of organisms living in different environments, and to advise those responsible for managing these populations in the context of global change. In particular, I analyse the genomic dynamics of positive selection signatures and genetic burden, for example in the context of population spatial expansion and small, isolated populations. My research focuses notably on populations of insects (pine processionary caterpillar, ash moth), birds (titmouse) and fish (gambusia and Atlantic salmon).

Before joining the CBGP in Montpellier in 2019, I worked at the CEFE in Montpellier from 2015 to 2019, at Laval University in Quebec City from 2011 to 2015, and at DECOD in Rennes from 2007 to 2010.

 

Keywords: population genetics, genomics, selection signatures, adaptation, maladaptation, genetic diversity, effective population size, gene flow, genetic burden, insects, birds, fish, management

Last publications
Sudyka J., Di Lecce I., Hebda G., Rowiński P., Rutkowski R., Szczuka A., Perrier C., Cholewa M., Maziarz M., Wesołowski T. & Szulkin M. 2026. Avian extra‐pair paternity in the last European primeval forest. Functional Ecology 40 : 338-346. (https://dx.doi.org/10.1111/1365-2435.70223)
Thompson M.J., Gervais L., Bharath D., Caro S.P., Chaine A.S., Perrier C., Reale D. & Charmantier A. 2025. Tit wit: environmental and genetic drivers of cognitive variation along an urbanization gradient. Animal Cognition 28 : 56. (https://dx.doi.org/10.1007/s10071-025-01962-1)
Perrier C., Allio R., Legeai F., Gautier M., Beneluz F., Marande W., Theron A., Rodde N., Herrera M., Sauné L., Parrinello H., McClure M. & Arias M. 2025. Transposable element accumulation drives genome size increase in Hylesia metabus (Lepidoptera: Saturniidae), an urticating moth species from South America. Journal of Heredity 116 : 344-353. (https://dx.doi.org/10.1093/jhered/esae069)
Muller* T., Gautier M., Lombaert É., Leblois R., Sauné L., Branco M., Kerdelhué C. & Perrier C. 2025. Population Genomics of Incipient Allochronic Divergence in the Pine Processionary Moth. Molecular Ecology 34 : e70189. (https://dx.doi.org/10.1111/mec.70189)
Dumas K., Marais G., Paitreault S., Avrillier J.-N., Rosa A., Hedde M., Rasplus J.-Y., Chérasse S., Ouvrard D., Reynaud P., Trap J., Filali Alaoui I., Noël F., Perrier C., Yannic G., Gallet C., Bernier N., Lavergne S. & Ibanez S. 2025. Cushion plants in the Alps are swarming with invertebrate life. Alpine Botany 135 : 203-214. (https://dx.doi.org/10.1007/s00035-025-00335-1)
Arias M., Ninnin P., Ten Hoopen M., Alvarado J., Cabezas Huayllas O., Valderrama B., Alguilar G., Perrier C., Dedieu F. & Bagny Beilhe L. 2025. The American cocoa pod borer, Carmenta foraseminis, an emerging pest of cocoa: A review. Agricultural and Forest Entomology 27 : 340-356. (https://dx.doi.org/10.1111/afe.12676)
Arias M., Behrendt L., Dressler L., Raka A., Perrier C., Elias M., Gomez D., Renoult J.P. & Tedore C. 2025. Testing the equivalency of human "predators" and deep neural networks in the detection of cryptic moths. Journal of Evolutionary Biology 38 : 214-224. (https://dx.doi.org/10.1093/jeb/voae146)
Hoste A., Capblancq T., Broquet T., Denoyelle L., Perrier C., Buzan E., Sprem N., Corlatti L., Crestanello B., Hauffe H.C., Pellissier L. & Yannic G. 2024. Projection of current and future distribution of adaptive genetic units in an alpine ungulate. Heredity 132 : 54-66. (https://dx.doi.org/10.1038/s41437-023-00661-2)
Di Lecce I., Sudyka J., Perrier C. & Szulkin M. 2024. Extra-pair paternity in two passerine birds breeding in a gradient of urbanisation. Molecular Ecology 33 : e17481. (https://dx.doi.org/10.1111/mec.17481)
Charmantier A., Burkhard T., Gervais L., Perrier C., Schulte‐Hostedde A.I. & Thompson M.J. 2024. How does urbanization affect natural selection?. Functional Ecology 38 : 2522-2536. (https://dx.doi.org/10.1111/1365-2435.14667)