Emerling C.A., Teullet S., Allio R., Gatesy J., Springer M.S. & Delsuc F. 2026. Pseudogenes document protracted parallel regression of oral anatomy in myrmecophagous mammals. Molecular Biology and Evolution 43 : msag009. (https://dx.doi.org/10.1093/molbev/msag009)

Haran J., Zelvelder* B., Archange Boupoya C., Couvreur T.L.P., Niangadouma R., Benoit L., Kergoat G.J., Buatois B., Dufäy M., Kojima H. & Allio R. 2026. New species of Endaeus Schoenherr, 1826 (Curculionidae: Curculioninae: Ochyromerini) associated with Annonaceae and Clusiaceae. European Journal of Taxonomy 1039 : 165–198. (https://dx.doi.org/10.5852/ejt.2026.1039.3185)

Allio R., Teullet S., Lutgen D., Magdeleine A., Koual R., Tilak M.K., de Thoisy B., Emerling C.A., Lefebure T. & Delsuc F. 2025. Transcriptomic data reveal divergent paths of chitinase evolution underlying dietary convergence in anteaters and pangolins. Genome Biology and Evolution 17 : evaf002. (https://dx.doi.org/10.1093/gbe/evaf002)

Battlay P., Hendrickson B.T., Mendez-Reneau J.I., Santangelo J.S., Albano L.J., Wilson J., Caizergues A.E., King N., Puentes A., Tudoran A., Violle C., Vasseur F., Patterson C.M., Foster M., Stamps C., Innes S.G., Allio R., Angeoletto F., Anstett D.N., Anstett J., Bucharova A., Comerford M.S., David S., Falahati-Anbaran M., Godsoe W., Gonzalez-Lagos C., Gundel P.E., Hood G.R., Lampei C., Lara C., Lazaro-Lobo A., Silva Leandro D., Merritt T.J.S., Mitchell N., Mohammadi Bazargani M., Moles A., Murua M., Paule J., Pfeiffer V., Raeymaekers J.A.M., Rennison D.J., Rios R.S., Rowntree J.K., Schneider A.C., Stack Whitney K., Tamburrino I., VanWallendael A., Kim P.Y., Ness R.W., Johnson M.T.J., Hodgins K.A. & Kooyers N.J. 2025. Haploblocks contribute to parallel climate adaptation following global invasion of a cosmopolitan plant. Nature Ecology and Evolution 9 : 1441-1455. (https://dx.doi.org/10.1038/s41559-025-02751-2)

Juvé Y., Lutrat C., Ha A., Weyna A., Lauroua E., Afonso Silva A.C., Roux C., Schifani E., Galkowski C., Lebas C., Allio R., Stoyanov I., Galtier N., Schlick-Steiner B.C., Steiner F.M., Baas D., Kaufmann B. & Romiguier J. 2025. One mother for two species via obligate cross-species cloning in ants. Nature 646 : 372-377. (https://dx.doi.org/10.1038/s41586-025-09425-w)

Perrier C., Allio R., Legeai F., Gautier M., Beneluz F., Marande W., Theron A., Rodde N., Herrera M., Sauné L., Parrinello H., McClure M. & Arias M. 2025. Transposable element accumulation drives genome size increase in Hylesia metabus (Lepidoptera: Saturniidae), an urticating moth species from South America. Journal of Heredity 116 : 344-353. (https://dx.doi.org/10.1093/jhered/esae069)

Allio R., Delsuc F., Belkhir K., Douzery E.J.P., Ranwez V. & Scornavacca C. 2024. OrthoMaM v12: a database of curated single-copy ortholog alignments and trees to study mammalian evolutionary genomics. Nucleic Acids Research 52 : D529-D535. (https://dx.doi.org/10.1093/nar/gkad834)

Coiro M., Allio R., Mazet N., Seyfullah L.J. & Condamine F.L. 2023. Reconciling fossils with phylogenies reveals the origin and macroevolutionary processes explaining the global cycad biodiversity. New Phytologist 240 : 1616-1635. (https://dx.doi.org/10.1111/nph.19010)

Comte A., Tricou T., Tannier E., Joseph J., Siberchicot A., Penel S., Allio R., Delsuc F., Dray S. & de Vienne D.M. 2023. PhylteR: Efficient identification of outlier sequences in phylogenomic datasets. Molecular Biology and Evolution 40 : msad234. (https://dx.doi.org/10.1093/molbev/msad234)

Condamine F.L., Allio R., Reboud E.L., Dupuis J.R., Toussaint E.F.A., Mazet N., Hu S.J., Lewis D.S., Kunte K., Cotton A.M. & Sperling F.A.H. 2023. A comprehensive phylogeny and revised taxonomy illuminate the origin and diversification of the global radiation of Papilio (Lepidoptera: Papilionidae). Molecular Phylogenetics and Evolution 183 : 107758. (https://dx.doi.org/10.1016/j.ympev.2023.107758)